Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLGPEGVTRGWLGAALGRDVSDLRLVRVGVDEGFTGTRLYRAEIGGGASVIVKLASEDAALRARFAAENAREVAFYHHYAE---GLPVPRCYHAASDAEAGASVVVLEDLGGARSVP-FVTGLS----RDEAEAAVRALARCHAAHWGAAGLADLPG-ASVAQELGFAACWDGYAQALQGLLPGADLSPEVLALGAAMARDAAAVLGPILDDGVLTLRHGDVQADNLMFDG-PGAVLLDWQFMARGRGGSDLAYLLISSLEPEVRRAHEAALIACYLNALQEQGIAYEHAALWRDYRRGVAVKLLMSVVATVGMDNQGAAKQAWRRADLARLLAFAADHGAGEAA
4DCA Chain:A ((25-270))-------LDAEIYEHLNKQ-IKINELRYLSS--GDDSD-TFLC----NEQYVVKVPKRDSVRI-----SQKRELELYRFLENCKLSYQIPAVVYQS------DRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKF--LQDKKLLISILEK---EQLLTDEMLEHIETIYENILSNAV--LFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCST-DDFGKEFGRKVLKYYQHK------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 909 -27017 -29.72 -114.48
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -29.72
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.272

(partial model without unconserved sides chains):
PDB file : Tito_4DCA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dca-query.scw
PDB file : Tito_Scwrl_4DCA.pdb: