Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQINPALAQAIEADSGFELTQVEFIGAGWFAQAYRFCSQAKHYVVRIS-KHYHDFLKDVYAYQH---WGQ-QLPIPAILAHGQFADGWAYAISPHIAGQTIVSLEAAELRQIQPALFK----SLQQLHQLKLGPVTGWGSVNSQGHGRYQSWAEEVLDIGNYKFDFDWHDWIKRDDQTGTLLRQGYRLMEQLLSTISTERSLI--HRDFGFDNVLCQPPTIVAVLDWADFGYGDWVYDIAQQSCYGQAEIYLQPWLKFAQQHDLIPDNFEKRLHCYWLRMNLTDLIVSQLRNDWHWQRKIVAELSWLIENPVVVRLNQ
3Q2J Chain:A ((4-222))MRISPELKKLIEKYRCVKDTE-----GMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVL-HFERHDGWSNLLMSEADG--VLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSR-------LAELDYLLNNDLADVDCENW--EEDTPFKDPRELY----DFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIA------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3Q2J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 829 -10375 -12.52 -49.88
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -12.52
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.210

(partial model without unconserved sides chains):
PDB file : Tito_3Q2J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3q2j-query.scw
PDB file : Tito_Scwrl_3Q2J.pdb: