Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMHSRPQISPERAAQLAAEWFEGQLDAPAELDSYADRNFLVRAPDGTKAVLKVPNVELAEDIDLQIAILKWLEARPSAPLVPRVLGPTRTIEDDAGRPTRAWMVGWIEGELWFDASPTPALREELGAALGQLARDLEDFRHPGMERHFAWNLAEANWIAEELHRFEDPARAELVCDALMQFQGRVLPRLAELPTQVIHGDANDKNLAVAEGRLVGVFDFGDACWCPAVCDLAIALAYAAMDLRLGCALPEVAAACAQVCAGYHGRRPLTALELDLLYDLLRARLAVSVTSSTRAREAEPDNAYVSASEQGAWSVLEALGAVGRRAFTATVAEACGLALAPRVPGARTGDELLAARRRRLGPSLSLSYASSGMPLYIRRGEGSWLFDEHDQAFLDCVNNVCHVGHCHPRVVEAGAAQMARLNTNTRYLHEGLVDYAEALCATLPAPLEVVYLVNSGSEANELALRLARDYTGGFDVAVLDAAYHGNTGNLVDMSP-YKFDAPGGRGRREWVHVLPTPDPYRGAHGDDGPAY----AAALDAADAAARGRGSRLAALFCESVLGCAGQVVPASGFLAAAYARARAAGAVCIADEVQVGFGRVGDGMWAFEAEGVVPDILTLGKPIGNGHPLGAVVTTRAIAEALGGGRMEFFCTFGGNPVSAAVGAAVLAVIEDEGLVANARDTGSWLRGAFEQLAADPVLGRGIGEVRGRGLFIGVELVEDRSTKRPDAARASAIVAHARARGVLLSTDGPARNVIKIKPPICFADVEARILASTLARALSATMR
5G4J Chain:A ((18-437))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLLARRYATIGPHSPLFYRQ---PLELVSGSGVWLTDAQGKVYLDGYNNVPHVGHANPAVADAIYQQLLTVNLHTRYLNSRVVEYAEALLSKFDGALERLFLTNSGSEANELALRIARQHTGNTGVLVSDFSYHGNTTSLAEITTGLTVHEPLG----AHVRALRIPD-VSGIAEVDVPVLLEQSLADVDAAIASLQAAGHGVSVFLFDPLFSTEGLLQLPSGYIEGVATRVRAAGGLVISDEVQSGFGRTGSGMWGYQMFNVEPELVTMGKPMGNGHPIGAVVTTAELLDEFGRHNM-FFNTFAGNPVSSAAGLAVLRYMDQEDLMAKADQLGKYIRKRLENIAQR---SGNVGSVRGRGLFFGIDIIESDGSRNPAPALTKILIEDMRERGVLISRVGPHDNVLKMRPPLVFGREHADILLGQLELSLAS---


General information:
TITO was launched using:
RESULT:

Template: 5G4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2334 -34567 -14.81 -83.29
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -14.81
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.275

(partial model without unconserved sides chains):
PDB file : Tito_5G4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5g4j-query.scw
PDB file : Tito_Scwrl_5G4J.pdb: