Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAPTEEMISVQKLVERLNAEYAF--EVDYIGADLGGFSSQNNQLTLKDKRRMVLKRCDQSQW--D-P---RNVDIATILAHHSSLIYAPLATVGGSSTFKFDGWVYAVFPYVDGEKLHQHSLDAETLKSAARALYAFHHIAHFAGSHAAQR--PNV---SDF-EREVTSVLEPTLSL--STDHADIIIRSIEAKRHILHSFSSDLSSINVGASSVIHGDFHNENILYRS--DHVVAILDFEMLHWGNVEDDIISFIALGCCNNGF-----S--EENLRMANIFVKEYLS--LHGENLDLHTALLRFIHLKSSSLFLQKMLIYTGNMLYAQIIERDNKLFPSIMKKHREISKTLSSL
4OCV Chain:A ((24-312))----------TNEALFDVASHFALEGTVDSIEPYGDGHINTTYLVTTDGP-RYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSG-FDANQLTETIAHFHDTPHRFEDFKKALA-ADELGRAAGCG-PEIEFYLSHADQYAVVMDGL-RDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAELL-----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1074 -11827 -11.01 -45.14
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -11.01
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.333

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: