Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFDNPDRSQNWSKTGKIADSSDLLPRFPELQRQPCQITSLGSAGGLSGGAIWRIECDRRLYALRRWPAETTSARLRYVHSLQRLWRESNL--KFIPELYTTAEGESFTENALGFWELAEWMPGAALEGDTISPQQRDAVAAAIAAIHQAAAQHESSLEPSPGLRQRLTMLQRWRTMDRTMLQDAIQRLGWPEFAAIAQQMLQSFAYAANTIGDELQAIVSTPLPLHACLRDIHREHIFL--TGALVSGVLDFGAVRIES---RAGDLARLCGSLFEDDRNRWDDFLARYERLR------------PLSAAERRAIAVFDRSAVLLTGLQWIEWIALERRQFPD--PAAVLSRLDISLRRLQFLLK----------------
4OCV Chain:A ((24-378))---------------TNEALFDVASHFA----LEGTVDSIEPYGDGHINTTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSGFD-ANQLTETIAHFHDTPHRFEDFKKALAADELGR------AAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAELLPFSGNLLTMECGMRFLADYLEGDVYFATKYPEHNLVRSRTQIKLVREMEQRADETRAIVADVMETT


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1540 -7722 -5.01 -24.28
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -5.01
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.381

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: