Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MDDFAEWVRVAFGLGEGPLVRTVGGRGADGDVWHLRVRDREYAVKRPFRA--FDPAAVRHEAALLEHLTSGGVEVPTHVASPEGQLVVEVPDHLGGGNARVSHWVTGTSVTDRTSEVAEQLGTLLAQLHRAAPATWDRPRSWHTAMVPPDEWAELVRRSSGQPWHQALVARHDDLTAYAEVVDRAGPGTGPFVLGHCDLHPDNALAAPDGSLRALDWEDCGPVDPTRELAKTLVQWHVLGESVDDDAITKTVAAYRDAGGPGLLADTPDFAMVLCSETNFLANQVRLALDVSAPGERRDQARGEITEALADYLPSIAAL--ERVLSVTRPG
1ZYL Chain:A ((4-328))SAFTFQTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNH-----QGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFE-DATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILW--RDGPMFVDLDDARNGPAVQDLWMLLNGD----KAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY


General information:
TITO was launched using:
RESULT:

Template: 1ZYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1481 27114 18.31 86.07
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 18.31
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.282

(partial model without unconserved sides chains):
PDB file : Tito_1ZYL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1zyl-query.scw
PDB file : Tito_Scwrl_1ZYL.pdb: