Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIESQAPMLE-MLWEPHDPRHALAERFGFSDSE----SASRWVAAMLDEHWGIRIDSCERILMS-GGNALAWVGTP-SGRLLAK-----WSVVLDCFPRL-------METARLTNWLHGRGLPVSVPVPTR-DGCLQVEVDR-VSMGLQREIVGDL-LDTG---------DLNQVRAAGVILAQLQDALAAY---------PDADQFLAP-VVSSKPL---------------TVRVTDWLDSRADHLPMAA-RDTLRGLVASAPP----DRLPRQLVHF-------DIRSANILWACGGVAAILDFEEAQHDHRIVELARAAVLLGTRY---HNWGPVSADVRTEFLTGYQSERLLTPAEAGWLHIVLLWQALAMVPPGDDPTGWGPSALSQLSQETAR--------------------
5L7J Chain:A ((7-459))TISGVTPVAVMTKPLPCPGKCIYCPTFAATPQSYTPESPAVLRAKSCEYQAYKQVALRLRIIQDMGHPTDKVELIIMGGTFLSADITYQYGFIKDCYDALNGVVAGSLEEAKTINE-TAQHRCVGLCIETRPDICGKAEIQRMIDFGTTRVELGVQMLDDDIYKLVERGHRVSDVAEATCLLREYGLKVHYHWMPGLPGSSPEKDLALSRMVFEDPRFCPDGLKLYPTMVVEGTILEQWWKEGRYTPYPNGTMTGLIADIKALVPPYVRISRVKCRCIRCREYSGEPTLRRLDYPAS-GGKEIFLSFEDASDT--LYGLLRLRIPCASLPVLGQKYGAKTGLVRE--LHVYGTELSLGH---RGLGRKLLAEAECLARDE-----FGLDSLAILSGVGAREYYRSLGYELVAGYMCKHLD


General information:
TITO was launched using:
RESULT:

Template: 5L7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1576 14278 9.06 45.33
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 9.06
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.201

(partial model without unconserved sides chains):
PDB file : Tito_5L7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5l7j-query.scw
PDB file : Tito_Scwrl_5L7J.pdb: