Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSEALEQFVVEEAGVGAPRGASWSRVDEGQGANRVWRVRWGPGSSVIVKRCGPGRAFVQERRAATRWAPAV-ADASRGLGHARVLAASQALRCLVFVDAGRGEEQVALSPAAFACAG-RYLARLHAL----------------------------------P-VDERDPVPLVEALARREARWLEGAPELRAVASSLGPGALADADWGPRVPCHRDFQPDNWLWD-GRTLTVVDFEHARPDARALDLAK-LWTRLDGDVDARANAA-F-WSAYLGPEPCSPSFLAQ-LRA-GLVLHGLASVAWGRSHDDEAFVAEGERAVALARSGREPPNPRAGTPLASL
2Q83 Chain:A ((11-346))LSAEDAKKLTELAENVLQGWDVQAEKIDVIQ--ALVWKVHTDSGAVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRP-FELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNVMLNAYESRAPLTEEQKQVMFIDMLFPYELYDVIREKYVRKSALPKEELESAFEYERIKANALRQLI-------


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1178 -9971 -8.46 -34.50
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -8.46
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.291

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: