Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRLLPNPERAWERAAHVQTLARAEIERRIPPFTGEVEVLSGGHANVNVRLGAERVLRVYRR-------DASAAPKEASLLAHGWRSFRVPA----VLSAGDDFLVLEHVPHVPLQDTAM------------CGAAVGRALAEIHGVGYDSAGFLGPELAVSVPFADCIGALRGHVDAVLDRLAPALRGELSERVRAF-----LDANAEALRALASA--PVLLHGDFKASNLHWLSSGELLVLDWEFAYAGPGLMDVGQLLRW-------SPGREFVAAFAGAYRESAPLPEEFERWAAA-----------------FDLFNLVGLLDGVEPGSRRAADVCGRISEVVER----------------------------------------
2OLC Chain:A ((5-396))------------KTPLYETLNESSAVALAVKLGLTLTCQEIGDGNLNYVFHIYDRALIIKQAVPYWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFA-SEHETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDGADREPLYEHVNQVWETFEETFSEAWQKDSLDVYANIDGYLTDTLSHIFEEAIGFAGCELIRRTIGLAHVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVIELFKLLVK


General information:
TITO was launched using:
RESULT:

Template: 2OLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1319 -16377 -12.42 -58.07
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -12.42
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.280

(partial model without unconserved sides chains):
PDB file : Tito_2OLC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2olc-query.scw
PDB file : Tito_Scwrl_2OLC.pdb: