Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLAGCDRCRASSPPDPVNESA--EFLQ----LLRQDGVVRTDDARLMPLTGGVSCE-IYLVEDGAERFVVKRALAKLK-VKADWFADICRNRYEWEFIRYVSRFLPAVVPALRHCSATGNYFAMEYLGGEFQNWKQQLLAGEARPEAAAQAGGLLAEI-------------HRHST----GDAEAKRIFDTTPNFYQLRIEAYLL---------ATGVKHPELRPLFEAEAARLAATR-ECLVHGDFSPKNILVSPERMVLLDCEVAWYGDPSFDLAFMLNHFFLKTLLHAPREVGMRRMVEAFWAAYQTGRPTPELETRVGRLLVMLLLARVDGKSPVEYLDVGRQDFVRQFARVMLHEEAPSLGVVTNAWFARLSQFTS
2PYW Chain:A ((8-277))---------------PLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLEPPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRLTEQVVFSDPYRVSTFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDLHTGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLIL------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 834 -15299 -18.34 -65.10
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -18.34
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.230

(partial model without unconserved sides chains):
PDB file : Tito_2PYW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2pyw-query.scw
PDB file : Tito_Scwrl_2PYW.pdb: