Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEEDRRHPRRQLDPALIASYLAGRKIELVQLMPLGKSNTNYRLTL-ADGEVCLLRLHHPGANAERENHILR-LVREIVPVPAVLASGS-----DWSIHSFVEGIPLADAPES-----VHAAAEALARIASLRFT-SSGWIQADGSIAPFDFGDGKSFVESMLERAD--VRAW-------VGADTAAALRRIEAAQPPAADDEPR---LVHGDFNPTNILVHQRAVTGILDWEFSHAGSPYMDIGNLLRHTDPAQHGALEAGLVAGGLNVPADWRQQAEMVDLSSHLEFLTTQRSDAFKQRCADWIRDFVERY
3W0O Chain:A ((9-233))--------------TSVEKFLIEKFGSVSDLMQLSEGEESRAFSFDVGGRGYVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLPETELPAVLQPVAEVMDAIAAADLSQTSGF----GPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDELMLW----AEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGDPLYEVANIF-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 654 -16584 -25.36 -82.92
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -25.36
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.252

(partial model without unconserved sides chains):
PDB file : Tito_3W0O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3w0o-query.scw
PDB file : Tito_Scwrl_3W0O.pdb: