Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKMRNLISNYELAKDLLKNWEYDEENLDEMLSYFRISSNAIYPFFYKKKICFLRIAPTDEKRKENIYGEIEFIQYLREHD-FKALCPVPSKNGEFIRIVNTKWGEYYATVFEKVAGKPVEACEYSEKMYHEYG-KTMGRMHRLSSGFKPIIK----------KWTHEDVLNE-IETML-T--------LYHCSNKAKIELENLRVELAKLP---------KNHLSYGLIHYDFELDNVFYDEKTNTCSVIDFDDGMYHWYSTDIEQ-FLDSVSEEKGELEAEQVK-IAFFEGYQSEYPIVEETKNS-IPL-MRRFINLYSYVRIHHCLSDSFTSEKEWMTELRVKLTNMLKSIEETW
2Q83 Chain:A ((11-346))-LSAEDAKKLTELAENVLQGWDVQAEKIDVI-------QALVWKVHTDSGAVCLKRI---HRPEKKALFSIFAQDYLAKKGMN-VPGILPNKKGS----LYSKHGSFLFVVYDWIEGRP---FELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGEN-EQIWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNVML---NAYESRAPLTEEQKQVMFIDML---FPYELYDVIREKYVRKSALPKEELESAFEYERIKANALRQLI


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1240 25600 20.65 86.20
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 20.65
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.337

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: