Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPINHEPLFDVLSQYDIKVVSIRNESYKDKKGVWW-IQTPD-EYKILKKISNS-EDTFKYILSAAEHLRKNGVNIPAVYKTKDGKDYVNINGTCYVLYEAVEGKNPSYN-------SPEDFRAIVRELAGFHAASVGFSPPDNTKPKIHLGKWVEQYTEQVEDMNRFYQTELEKSENDRIGKVIIEEFPAFYERAKQAIEGLKGKEYQDWVE-KVKSRGGLCHQDFAAGNLLKNPS----GKIFVLDTDSITIDIPARDIRKLLNKIMKKNGKWDLEILRKFIRIYQSENPLSFSEWTVVKFDLMFPHLFLGAMNKFYYKRDKEWSFEKYLKRINEMTALEKTITPVLENFDSIVYEEINQRKD
3CSV Chain:A ((4-280))--SREDEIRDFLATHGYADWNRTP--------RYQRLRSPTGAKAVLMDWSPEEGGDTQPFVDLAQYLRNLDISAPEIYAEEHA--------RGLLLIEDLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLD------PETLSEMTRLA---FSEYRYAILG------------D---AAEDNRKRFEHRFAQ-----ILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYDLVSLLQDARRD---VPAQVEAQMIDHYIQATGVDESHFRSAYAVI-AVQRNMRILGIFARL--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1108 1474 1.33 5.80
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 1.33
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.280

(partial model without unconserved sides chains):
PDB file : Tito_3CSV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3csv-query.scw
PDB file : Tito_Scwrl_3CSV.pdb: