Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAAEAGADTDAALLALAQRLAAQAG-KATPTALTRLAGGRNNQVFRVDTEAGPLVLKRYFTDARDSRDRLGAEWSFISHAWSRGVRVVP-----EPMACDRAVQAGLYSFVEGRKLTAAELAPAHVDAAIDFVLAV-NAPPRPTLAPGSEACFSLAEHIATVERRVARLATLDADVPHVSEARQFVATRLQPAWAEVKATILRGAAAEGLALDAAIPADQVCLSPSDFGFHNALIDDQGKLTFLDFEYAGRDDPAKLVSDFFCQPEVPVPLAAHEHFIDRLADGLGLDAASVARCRLLLDAYQVKWTCIILNDFLPLGAVRRAFADTGAWAQRCAVQLAKAEAQLGLIGATSD
3I1A Chain:A ((3-330))--------KQPIQAQQLIELLKVHYGIDIHTAQFIQGGADTNAFAYQADSESKSYFIKLKY---GYHDEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNGFTQNLTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQP-------DLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEP---MLAPKERDLMFIGGGVGNVWNKPHEIQYFYEGYGEINVDKTILSYYRHERIVEDIAVYGQDLLSRNQNNQSRLESFKYFKE-----MFDPNNVVEIAFATE


General information:
TITO was launched using:
RESULT:

Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1474 -6998 -4.75 -21.80
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -4.75
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.233

(partial model without unconserved sides chains):
PDB file : Tito_3I1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3i1a-query.scw
PDB file : Tito_Scwrl_3I1A.pdb: