Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDESGGEARAYMLGSGIVVKTQRPHRLRPRTSLEKEAHVLSLLAGP-LAGRIPRLFGYGREDTAAGPVEFLVMSRIRGCAALHAG-----LPAREALLASLADVLRSVHAADVTGLRDSGLLPADVDSAALRGRLQLGFADACDGFAAHRDRYA-GAGAPERIAIAAVDALAG---LTDESPVLLHSNPGPTHVFVGDGGLCTGLIDFGDAYASHPALDLRSWP-------DPADRIVLHEAYTGGRPTT-RGFDAVWTVVMILADLNAMLHRADLAEAAGRDLALRLAQL
4DCA Chain:A ((47-298))---SGDDSDTFLCNEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ--------SDRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCS---VS-LFSD-ALV--NKKDK-FLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRN-NRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKEFGRKVLKYYQHKAPEVAERKAELNDVYWSIDQIIYGYERK-----------------


General information:
TITO was launched using:
RESULT:

Template: 4DCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 948 -832 -0.88 -3.56
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -0.88
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.323

(partial model without unconserved sides chains):
PDB file : Tito_4DCA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dca-query.scw
PDB file : Tito_Scwrl_4DCA.pdb: