Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQVDTLDTQKLAEYLEQHIDGF-KGPIEAD--KFEGGQSNPTFKITAA--------SGAYVLRRQPPGKLL--KSAHAVDREFRVMAALKD-TDVPVPNVLHLCEDRDVIGSMFYVMEFCEGRILWSAGL--------PEMGEGEAANAVRGEMYSEMNRVLAAMHSVDLEAVGLTDYGKPGNYFERQ---LGRWTQQYEASKLQEIPAMDSLIEWLQANQPED--DGQVSLVHGDYRLDNMMWHPEKPQVIAVLDWELSTLGHPLADLAYQCMGMRMPQRGAKMAGLQGKDRTALGIP---TEKEYVAMYCERRGISQIDNWEFYLAFSFFRLAAICQGVAKRAEDGNASNKQAAEVGALVEPLATMAMQIINEGA
3ATT Chain:A ((4-328))---------AVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAE-----RQRQLQDATVAALATLHSIPNAQNTFSFLT--DTTLHRHFNWVRSWYDFAVEG-IGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDF--QPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAG-------LATLPGLPEVMREDDVRATYQALTGVE-LGDLHWFYVYSGVMWACVFMRTGARRV-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ATT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1299 -28666 -22.07 -98.85
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -22.07
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_3ATT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3att-query.scw
PDB file : Tito_Scwrl_3ATT.pdb: