Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSARIAERAMAALGRSGMGARATRVGGGRASEVFLVQGGDSELIAYWLPEGGAREARRRFALLERMAGQFRLAPRPLAVDEDG---DAALLLVEKLEGVAPAACGP--LAPDTVRRLAENFIGTLASLHALEVAPADR-----PPDYLRRILSEWRRRWNAEEAGGAIDADFSAVADWLTERMPE--TAPAAWLHNDYKLDNILVDPGDPARVVGVVDWELAAVGHPLADLGAALAYWIESRDSSLLRLDAPGPSCAPGAPTREALVDLYAAAAGREV-TEPAYWYAYGLLRLAVITQQLALRRRDEGQRVPRAK-L--IVRWLLDRAAEACGGGRL
3DXP Chain:A ((41-357))-------------------LSVEQFKG-QSNPTFKLVTPGQTYVMRAKPG----AIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSE-TESI-PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTE-PRVLAVLDWELSTLGHPMGDFGYHCMSWHIAPGQFRGIA-G-LDHAALGIPDEASYRKLYEQRTGRPITGDWNFYLAFSMFRIAGILQGIMKRVVDGTASSAQALDAGKRARPMAEMGWEYAKKA--


General information:
TITO was launched using:
RESULT:

Template: 3DXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1269 -47442 -37.39 -163.59
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -37.39
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_3DXP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxp-query.scw
PDB file : Tito_Scwrl_3DXP.pdb: