Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIEDKIVEIATRVFQVNE---IDVRVDSRFKGGMSNYTYLVYVKE----------QPYVIRIIGDGGEVLVKPSIEKKHIQQAKALNLNSELVYFDSKTGVKVSKYVEGTPLSVS--MEETDYPLVANALKTLHQAKLPGE---DYG----LKERLRRYEKLLKKEPS-----TTYY---TLKMQWLKLYDAY----FSKLPKVLCHGDAQRSNLVKSGDKIYLLDWEFSGLNDPYYDIASFGN-IDF--------------------KDAEKLLGYYLERTP-----S----AFELAHIRFYRMYQVLQWHIVATYKHEINLSEKLHLDFEMIAGKYLSLAGHFLEQLKEIEQFK
3C5I Chain:D ((17-365))------IKKICLEKVPEWNHFTEDNLRVKQIL--LTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--NGGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTNKCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGYQTK-SYNEFDFFLYAEQRLKMYDDQKEYLISNNII-


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1095 15076 13.77 53.65
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain D : 0.64

3D Compatibility (PKB) : 13.77
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: