Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKPELIELATSCFGLT-VDEQLPIGESFASEVLRFRS-GRQCYVLKRPFSL---EKAEREYFWLKRLSH--CPFVPDALEITKA-NDHG----LILMTSLEGMPLKSFHQ--LSHRDLSKLGHDLRALHTVSADSFDGHKSWR---ELLLSNTDRYIDKIIGPARKTAEMAYARFHEGIDE-IPDSYLPTATHFDFRDGNILADE-SGYTGIIDFESMRGGHASMDFFKLLTHPSDMNDIELTALLAGYGSADWLESMAQLKHLVACYAVYHGLAGLAWCSQREQTSTEFYQRCAGFLEQGR
5IGH Chain:A ((9-300))--TSQLYALAAR-HGLKLHGPLTVNELGLDYRIVIATVDDGRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTAMVIQPGSSTPDWVVPQDSEVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDRVRREFVV-NDKRLHRWQRWLDDDSSWPDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVF---GEEGLAKLLLTYEAAG-GRVWPRLAHHIAERLAFGAVTYALFALDSG--NEEYLAAAKAQLAAA-


General information:
TITO was launched using:
RESULT:

Template: 5IGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1214 -27057 -22.29 -99.11
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -22.29
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.385

(partial model without unconserved sides chains):
PDB file : Tito_5IGH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igh-query.scw
PDB file : Tito_Scwrl_5IGH.pdb: