Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTTPDL-PKERVITQEEFDNAVKLGGKFAPVFKV---DEKTVVKT-------SDMTQLGEAAAMKMVREKTTIPVPEDQNVYTDPTTGDVPIVMDFIEGDCLLDVWDTYDNDQKQQIIEQLHSYFAQLRELKGSFIGSVDGKFCFDQVFDQDIGGHGPYEDEASFNEGLVKALKNTMISGWGDTVCDMVLAMKDHEIVFTHGDISPRNILVKDCNIVSVLDWEYSGYYPEYWEYAKAFFRPAWEKSWIKDRAVNKILKPY-----PLENAICQHVFSFGAW
1J7L Chain:A ((2-264))--AKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWL--EGKLPVPKVLHFERHD--GWSNLLMSEADGVLCSEEYE--DEQSPEKIIELYAECIRLFHSIDIS-------DCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSI--REDIGEEQYVELFFDLLGIKPDWEKIKYYILLDELF--


General information:
TITO was launched using:
RESULT:

Template: 1J7L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1115 43707 39.20 176.95
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 39.20
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.300

(partial model without unconserved sides chains):
PDB file : Tito_1J7L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1j7l-query.scw
PDB file : Tito_Scwrl_1J7L.pdb: