Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRLHAFIDLDRGAVADLTADYSLGELRSVEPLVTGIINTNYV-LRTDA-GDFLLRLYPPERSADALRFEFSTLARLAEANFPCPRVIANREGKTVAWSEAHARHYAVLEFIPGTTLPRE-------AIDAGVVDQIGSLFADMQRTLSGFVPEGDKPRADLEFVRELGQATLDRIAALP-GEGPATAERLRQVWARSHARFDQPKGSVPALERGVVHADLYFDNVIVEGD----QIRGVIDFDDSYFGLFLIDLAVTLMEFTFVEADALDFELGERLLRRYYARRPEAKGEAHLLHDGMI-CACYKYLGYTADLPEYA-GE----ALLGNEYIARIDYLARPEIRAKVEAMIAAAVEVPA
3CSV Chain:A ((4-318))---------SREDEIRDFLATHGY-ADWNRTP--------RYQRLRSPTGAKAVLMDWSPE-EGGDTQPFVDLAQYLRNLDISAPEIYAEEH----------ARGLLLIEDLGDALFTEVINNDPAQEMPLY--RAAVDLLIHLHDAQTPELARL-DPETLSEMTRLAFSEYRY--AILGDAAEDNR--KRFEHRFAQILSA------QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYDLVSLLQDARR----DVPAQVEAQMIDHYIQATGVDESHFRSAYAVIAVQRNMRILGIFAR-LSQRFGKRHYIEFVPRVWAHFERGLAHPALASAAEEILN-------


General information:
TITO was launched using:
RESULT:

Template: 3CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1315 -18971 -14.43 -66.10
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -14.43
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.326

(partial model without unconserved sides chains):
PDB file : Tito_3CSV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3csv-query.scw
PDB file : Tito_Scwrl_3CSV.pdb: