Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEAARETRLPCAAMAILTPLSLADARRIGALYGLEIADVRGLLAGSVNSNFALTLADGRGQVFLRVYEEQQLGAASREARMLEHLAAGGVATPQPLRRRDAAPSDTDAASDGAAFVAEHAGKPVALFPWVGGASLCQARVTPDATRRVGAALARVHL------VGASFEGANASRFDLDGLDQRLRGL--RSPAGARSTAPAPALPPDVAAAV---DELTGRLERIRAAAPRTPGPQTLIHGDLFRDNVLWEAGEISALLDFESASRGSAAFDLAVTMLAWCF--------------------GDDLDPDLVSALAAGYTAVRPLSTEERDRLFHESVIAALRFSITRITDFELRPKGSGVYKDFRRFLARQRTLERLGPEGLLALLGV------------------
2OLC Chain:A ((5-396))---------------KTPLYETLNESSAVALAVKLGLTLTCQEIGDGNLNYVFHIYDR--ALIIKQAVPYWPLTIDRARIESSALIRQGEHVPHLV------PRVFYSDTEMAVTVMEDLSHLKIARKGLI-----EGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLT--SAETLIHGDLHTGSIFASEHE-TKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDGADREPLYEHVNQVWETFEETFSEAWQKDSLDVYANIDGYLTDTLSHIFEEAIGFAGCELIRRTIGLAHVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVIELFKLLVK


General information:
TITO was launched using:
RESULT:

Template: 2OLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1645 -57839 -35.16 -176.88
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -35.16
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.292

(partial model without unconserved sides chains):
PDB file : Tito_2OLC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2olc-query.scw
PDB file : Tito_Scwrl_2OLC.pdb: