Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIEDKIVEIATRVFQV-NE---IDVRVDSRFKGGMSNYTYLVYVKE---------QPYVIRIIGDGGEVLVKPSIEKKHIQQAKALNLNSELVYFDSKTGVKVSKYVEGTPLSVS--MEETDYPLVANALKTLHQAKLPGE-DY-GLKERLRRYEKLLKKEPS------TTYY-TLKMQWLKLY---DAYF--SKLPKVLCHGDAQRSNLVKSG-------DKIYLLDWEFSGLNDPYYDIASFGN-ID-----------------F---KDAEKLLGYYLERTP--------------SAFELAHIRFYRMYQVLQWHIVATYKHEINLSEKLHLDFEMIAGKYLSLAGHFLEQLKEIEQFK
5FTG Chain:A ((11-376))-----RAYLWCKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG------EAMVLESVMFAILAERSLGPKLYGIF--PQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISS---IEFGYMDYAQARFDAYFHQKRKL-------


General information:
TITO was launched using:
RESULT:

Template: 5FTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1026 -26246 -25.58 -97.21
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -25.58
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_5FTG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ftg-query.scw
PDB file : Tito_Scwrl_5FTG.pdb: