Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDDFAEWVRVAFGLGEGPLVRTVGGRGADGDVWH-LRVRD-REYAVKRPFRAFDPAAVRHEAALLEHLTSGGVEVPTHVASPEGQLVVEVPDHLGGGNARVSHWVTGTSVTDR-------TSEVAEQLGTLLAQLHRAAPATWDRPRSWHTAMVPPDEWAELVRRSSGQPWHQALVARHD-DLTAYAEVVDRAGPGTGPFVLGHCDLHPDNALAAPD----GSLRALDWEDCGPVDPTRELAKTLVQWHVLGESVDDDAITKTVAAYRDAGGPGLLADTPDFAMVLCSETNFLANQVRLALDVSAPGERRDQARGEITEALADYLPSIAALERVLSVTRPG
3CSV Chain:A ((7-257))--DEIRDFLATHGYAD--WNRTP--------RYQRLRSPTGAKAVLMDWSPE-EGGDTQPFVDLAQYLRNLDISAPEIYAEEH------------ARGLLLIEDLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPE-L-ARLDP--ETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA--QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYDLVSLLQDARRD---VPAQVEAQMIDHYIQATGVDESH----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 956 20548 21.49 89.73
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 21.49
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.236

(partial model without unconserved sides chains):
PDB file : Tito_3CSV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3csv-query.scw
PDB file : Tito_Scwrl_3CSV.pdb: