Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAAEAGADTDAALLA-LAQRLAAQAGKATP-TALTRLAGGRNNQVFRVDTE-AGPLVLKRYFTDARDSRDRLGAEWSFISHAWSRGVRVVPEPMACD-------RAVQAGLYSFVEGRKLTAAELAPAHVDAAIDFVLAVNAPPRPTLAPGSEACFSLAEHIATVERRVARLATLDADVPHVSEARQFVATRLQPAWAEVKATILRGAAAEGLALDAAIPADQVCLSPSDFGFHNALIDDQGKLTFLDFEYAGRDDPAKLVSDFFCQPEVPVPLAAHEHFIDRLADGLGLDAASVARCRLLLDAYQVKWTCIILNDFLPLGAVRRAFAD-TGAWAQRCAVQLAKAEAQLGLIGATSD
1ZYL Chain:A ((9-319))-----------QTLHPDTIMDALFE-HGIRVDSGLTPL-NSYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVP-VAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA--DNIDQMEAVGRYLGRMHQTGRKQLFIHR-PTIGLNEYLIEPRKLFEDAT-LIP-------------SGLKAAFLKATDELIAAVTAH------WREDFTVLRLHGDCHAGNILWRD--GPMFVDLDDARNGPAVQDLWMLLNGDK-AEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVYYLAWLMRRWADPAF-PKNFPWLTGE--DYWLRQTATFIEQAKVLQE---


General information:
TITO was launched using:
RESULT:

Template: 1ZYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1368 7633 5.58 25.44
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 5.58
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.318

(partial model without unconserved sides chains):
PDB file : Tito_1ZYL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1zyl-query.scw
PDB file : Tito_Scwrl_1ZYL.pdb: