Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLAGCDRCRASSPPDPVNESAEFLQLLRQDGVVRTDDARLMPLTGGVSCEIYLVEDGAERFVVKRALAKLKVKADWFADICRNRYEWEFIRYVSRFLPAVVPALRHCSA---TGNYFAMEYLGGEFQNWKQQLL---AGEARPEAAAQAGGLLAEIHRHSTGDAEAKRIFDTTPNFY-QLRIEA-YLL----ATGVKH-PELR-PLFEAEAAR--LAATRECLVHGDFSPKNILVSP----ERMV-LLDCEVAWYGDPSFDLAFMLNHFFLKTLLHAPREVGMRRMVEAFWAAYQTGRPTPELETRVGRLLVMLLLARVDGKSPVEYLDVGRQDFVRQFARVMLHEEAPSLGVVTNAWFARLSQFTS
3TDW Chain:A ((6-276))--------------------LHYTTMIMTQ-FPDISIQSVESLGEGFRNYAILVN---GDWVFRFPKSQQ--------GADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG--QILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISA-GVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQS-YMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYLLEDCGE--------------LFTRQVMAYRGEVDLDTHIRKVSLFVTFDQVSYLLE----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3TDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1060 -61505 -58.02 -246.02
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -58.02
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.293

(partial model without unconserved sides chains):
PDB file : Tito_3TDW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3tdw-query.scw
PDB file : Tito_Scwrl_3TDW.pdb: