Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPGDRMMASALGSWTRLAPFAGLDPAAFEAEELWRREDP------GQVRIVLRMRGGAGQDLVFKRVFQPQDRGRWAEALDGQRRAVR---------ALMRDPVHVPPAILAEDAETLSTVQDFVPGRTLQDHMLLRFDKPGARAQVLQRAGRFLAAFH-GATAEGDKP------FNPATMLDYIRALGRRALSGDLT--LADPDLFAVLAEGLEAAAQTAAGQPVRVAAQHGDLHARNLIVSGKRATLIDFAQDRSAPVQYDMARLIVDLGARFSG--------DAAPEATCGLPAA-DLAALSDGYGRDLSQDACLAFLCRCRVLQDWAALPAVASQRSAFQQERLLQLQKTATRLAAA--
1B6C Chain:B ((14-339))TTLKDLIYDM-------TTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL---------VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL----------VKKNGTCCIAD---LG-LAVRHDSATDTIDIAPNHRVGTKR-YMAPEVL-----DDSINM-KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG


General information:
TITO was launched using:
RESULT:

Template: 1B6C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1503 1554 1.03 5.34
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : 1.03
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.282

(partial model without unconserved sides chains):
PDB file : Tito_1B6C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1b6c-query.scw
PDB file : Tito_Scwrl_1B6C.pdb: