Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEEDRRHPRRQLDPALIASYLAG-RKIELVQLMPLGKSNTNYRLTLADGEVCLLRLHHPGA---NA-ERENHILRLVRE-IVPVPAVLASG-SDWSIHSFVEGI-PLADAPE-S-VHAAAEALARIASLRFTSSGWIQADGSIAPFDFGDGKSFVESMLERADVRAWVGADTAAALRRIEAAQPPAADDEPRLVHGDFNPTNILVHQRAVTGILDWEFSHAGSPYMDIGNLLRHTD--PAQHGALEAGLVAGGLNVPADWRQQAEMVDLSSHLEFLTTQRSDAFKQRCADWIRDFVERY
4R78 Chain:A ((20-253))-------HMEKIIKEKISSLLSQEEEVLSVEQL-GGMTNQNYLAKTTN-KQYIVKFFGKGTEKLINRQDEKYNLELLKDLGLDVKNYLFDIEAGIKVNEYIESAITLDSTSIKTKFDKIAPILQTIHTSAKELRGEFAP-FEE----IKKYESLIEEQIPY----AN-YESVRNAVFSLEKRLA-DLGVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDLAALFLESEFTSQEEETFLSHYESDQT---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 918 7162 7.80 32.26
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 7.80
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.302

(partial model without unconserved sides chains):
PDB file : Tito_4R78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r78-query.scw
PDB file : Tito_Scwrl_4R78.pdb: