Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQAALAPGGFDEFEMHQVLKRGCAAVGLDSSEARL-LRGHTNAVIHLVK---EHVVVKIARKGSRIDDVARTVRFVRWLMD-AGFPTVSLHPVDQPVGVGQHALTFWEYLPQPS-D----------------PVPAAQLAKPLYSLHTLPASPEAL---PA---HDNLAAIRRSLKSITCLSDEALAFLNGSTEQLESALHVVQFELPEGVIQGDPQHRNALHTASGGAVLCDWDTVAIGQPEWDLVTVEVHCRRFGHGSQHYEAFANTYGWDVTRWSGYQTLAAIRELRMITTNARKVSDAPTSLQEVERRVEGLRCHDRALRWNIL
5UXD Chain:A ((5-250))----------EDLDALLDLAARHGLDL--DGGTLRTEEIGLDFRVAFARAHDGGDWVLRLPRRPDVLERAAVEGRLLAMLAPHLDVAV------PDWRIST-SELIAYPLLPGSPGLTVAADGEVSWHVDMASTVYARSLGSVVAQLHAVDAEAAAATGIEVRSPAQVRGAWRQDLARVGAE-FEIAPALRERWEAWLADDG--CWPGHSVLTHGELYPAHTLVEDERITAVLDWTTAAVGDPAKDLMFHQVS---AP--SAIFEVALQAYAE--------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 809 -19740 -24.40 -90.55
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -24.40
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.228

(partial model without unconserved sides chains):
PDB file : Tito_5UXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxd-query.scw
PDB file : Tito_Scwrl_5UXD.pdb: