Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQVDTLDTQKLAEYLEQHIDGFKGPIEADKFEGGQSNPTFKITAASGAYVLRRQPPGKLLKSAHAVDREFRVMAALKDTDVPVPNVLHLCEDRDVIGSMFYVMEFCEGR-ILWSAGLPEMGEGEAANAVRGEMYSEMNRVLAAMHSVDLEAVGLTDYGKPGNYFERQLGRWTQQYEASKL-QEIPAMDSLIEWLQANQPEDDGQVSLVHGDYRLDNMMWHPEKPQVIAVLDWELSTLGHPLADLAYQCMGMRMPQRGAKMAGLQGKDRTALGIPTEKEYVAMYCERRGISQIDNWEFYLAFSFFRLAAICQGVAKRAEDGNASNKQAAEVGALVEPLATMAMQIINEGA
4R78 Chain:A ((22-275))--------EKIIKEKISSLLSQEEEVLSVEQL-GGMTNQNYLAKTTNKQYIVKFFGKGTE--KLINRQDEKYNLELLKDLGLDVKNYLFDIE------AGIKVNEYIESAITLDST-------------SIKTKFDKIAPILQTIHTSAKELRGE--FAPF-----EEIKKYESLIEEQIPYANYESVRNAVFSLEKRLADLGVDRKSCHIDLVPENFIESPQ-GR-LYLIDWEYSSMNDPMWDLAALFLESEFT------------------SQEEETFLSHYESDQTPVSHEKIAIYKILQDTIWSLWT---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1160 -35471 -30.58 -140.76
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -30.58
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.302

(partial model without unconserved sides chains):
PDB file : Tito_4R78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r78-query.scw
PDB file : Tito_Scwrl_4R78.pdb: