Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTGHGMAGDDWQYRKTMPQNILRPTVEAALPHV-----AGAEWEPLAGGRTNPVFKIN-AD----------APLVCKLSCLSGETPLFGNRALDEAAILKHLEGSGLAPSLTDVLAVPEGEILIYSFVEGDILTQ-------TIPAAVRILRQVHQAEIPDNLPRLDGS-SAAIIQKTKAILETLPV---------QKA---M-----AISFAEPKVELPDTLVPRLIHGDPVPANFIQSKGKLTLIDWQCPAIGDPCEDLAIALSPAMNAVYG----------DGPLTPQQMKECLNAYGD-RT----V--------SDRYRKLAPLFHWRMAAYCAWKVEQG---D-KDYAAGVKLELAALK
3C5I Chain:D ((11-349))---------------LTDPLYIKKICLEKVPEWNHFTEDNLRVKQIL--LTNQLFEVGLKEETANNYNSIRTRVLFRIYGK--HV-DELYNTISEFEVYKTMSKYKIAPQLLNTFN---G-GRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLP-EHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTNKCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGYQTKSYNEFDFFLYAEQRL----


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1021 -25095 -24.58 -93.99
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain D : 0.64

3D Compatibility (PKB) : -24.58
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.335

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: