Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMHSRPQISPERAAQLAAEWFEGQLDAPAELDSYADRNFLVRAPDGTKAVLKVPNVELAEDIDLQIAILKWLEARPSAPLVPRVLGPTRTIEDDAGRPTRAWMVGWIEGELWFDASPTPALREELGAALGQLARDLEDFRHPGMERHFAWNLAEANWIAEELHRFEDPARAELVCDALMQFQGRVLPRLAELPTQVIHGDANDKNLAVAEGRLVGVFDFGDACWCPAVCDLAIALAYAAMDLRLGCALPEVAAACAQVCAGYHGRRPLTALELDLLYDLLRARLAVSVTSSTRAREAEPDNAYVSASEQGAWSVLEALGAVGRRAFTATVAEACGLALAPRVPGARTGDELLAARRRRLGPSLSLSYASSGMPLYIRRGEGSWLFDEHDQAFLDCVN--NVCHVGHCHPRVVEA---------GAAQMARLNTNTRYLHEGLVDYAEALCATLPA-PLEVVYLVNSGSEANELALRLARDYTGGFDVAVLDAAYHGNTGNLVDMSPYKFDAPGGRGRREWVHVLPTPDPYRGAHGDDGPAYAAALDAADAAARGRGSRLAALFCESVLGCAGQVVPASGFLAAAYARARAAGAVCIADEVQVGFGRVGDGMWAFEAEGVVPDILTLGKPIGNGHPLGAVVTTRAIAEALGGGRMEFFCTFGGNPVSAAVGAAVLAVIEDEGLVANARDTGSWLRGAFEQLAADPVLGRGIGEVRGRGLFIGVELVEDRSTKRPDAARASAIVAHARARGVLLSTDGPARNVIKIKPPICFADVEARILASTLARALSATMR
5M4B Chain:A ((26-424))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FPLAVAGGQGARLVEEDGRELIDLSGAWGAASLGYGHPAIIEAVSRAAANPAGASILSASNAPA-------VALAERLTASFP-RGTHKVWFGHSGSDANEAAYRAITRATGRTGVIAFIGAYHGCTVGSMAFSGHSVQADAAKA--DGLILLPYPDPYRPYQDDPTGDAVLALLKERLAAVPAGS-IAAAFIEPIQSAGGLIVPPDGFLRKFADICRAHGISVVCDEVKVGLARSGR-LHCFEHEGFVPDILVLGKGLGGGLPLSAVIAPAEILDCASAFAMQ---TLHGNPVCAAAGLAVLETIEAENLTTAAERKGKLLREGLARLAERHEL---IGDIRGRGLACGVELVRNRQSREPARAETAKLIYRAYELGLVLYYVGMNGNVLEMTPPLTMTEDEVRHAVNLLDQAFT----


General information:
TITO was launched using:
RESULT:

Template: 5M4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2252 -29840 -13.25 -77.30
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -13.25
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.244

(partial model without unconserved sides chains):
PDB file : Tito_5M4B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5m4b-query.scw
PDB file : Tito_Scwrl_5M4B.pdb: