Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDDFAEWVRVAFGLGEGPLVRTVGGRGADGDVWHLRVRDREYAVKRPFRAF-DPAAVRHEAALLEHLTSGGVEVPTHVASPEGQLVVEVPDHLGGGNARVSHWVTGT-SVTDR-TSEVAEQLGTLLAQLHRAAPATWDRPRSWHTAMVPPDEWAELVRRSSGQPWHQALVARHD-DLTAYAEVVDRAGPGTGPFVLGHCDLHPDNALAAPDGSLRALDWEDCGPVDPTRELAKTLVQWHVLGESVDDDAITKTVAAYRDAGGPGLLADTPDFAMVLCSET-NFLANQVRLALDVSAPGERRDQARGEITEALADYLPSIAALERVLSVTRPG
4R7B Chain:A ((40-275))------------------LSVEQL-GGMTNQNYLAKTTNKQYIVKFFGKGTEKLINRQDEKYNLELLKDLGLDVKNYLFDI-------------EAGIKVNEYIESAITLDSTSIKTKFDKIAPILQTIHTSAKEL-R-GEFAP-FEE----IKKYES-LIEEQIPYANYESVRNAVFSLEKRL---ADLGVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDLAALFLESEF-----TSQEEETFLSHYESDQTPVSHEKIAIYKILQDTIWSLWT------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R7B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1020 20089 19.69 86.96
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 19.69
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.239

(partial model without unconserved sides chains):
PDB file : Tito_4R7B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r7b-query.scw
PDB file : Tito_Scwrl_4R7B.pdb: