Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKMRNLISNYELAKDLLKNWEYDEENLDEMLSYFR-ISSNAIY--PFFYKKKICFLRIAPTDEKRKENIYGEIEFIQYLREHDFK-ALCPVPSKNGEFIRIVNTKWGEYYATVFEKVAGKPVEACEYSEKMYHEYGKTMGRMHRLSSGFKPII------KKWTHEDVLNEIETMLTL------YHC-SNKA----KIELENLRVELA----KLPKNHLSYGLIHYDFELDNVFYDEKTNTCSVIDFDDGMYHWYSTDIEQFLDSVSEEKGELEA-EQVKIAFFEGYQSEYPIVEETKNSIPLMRRFINLYSYVRIHHCLSDSFTSEKEWMTELRVKLTNMLKSIEETW
3I1A Chain:B ((6-291))-------IQAQQLIELLKVHYGIDIHTA----QFIQGGADTNAFAYQADSESKSYFIKLKYGY---H--DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQ----LKHFKIIAYPFIHAPNGFTQNLTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNE-ESIYIIDWDEPMLAPKERDLMFIGGGVGNV----WNKPHEIQYFYEGYGEINV----DKTILSYYRHERIVEDIAV----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1012 -1135 -1.12 -4.36
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -1.12
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.327

(partial model without unconserved sides chains):
PDB file : Tito_3I1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3i1a-query.scw
PDB file : Tito_Scwrl_3I1A.pdb: