Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQAALAPGGFDEFEMHQVLKRGCAAVGLDSSEARL-LRGHTNAVIHLVKEHVVVKIARKGSRIDDVARTVRFVRWLMDA-GFPTVSLHPVDQPVGV----GQHALTFWEYLPQPS--D-----------PVPAAQLAKPLYSLHTLPASPEA---LPAHDNLAAIRRSLKSI-----TCLSDEALAFLNGSTEQLESALHVVQFELPEGVIQGDPQHRNALHTA---S-GGAVLCDWDTVAIGQPEWDLVTVEVHCRRFGHGSQHYEAFANTYGWD---VTRWSGYQTLAAIRELRMITTNARKVSDAPTSLQEVERRVEGLRCHDRALRWNIL
3TDW Chain:A ((4-300))-----------NKLHYTTMIMTQFPDI--SIQSVESLGEGFRNYAILVNG-DWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNI------PQYVYIGKRSDGNPFVGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHP--VYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYLLEDC---GE---LFTRQVMAYRGEVDLDTHIRKVSLFVTFDQVSYLLEGLRARD--QDWISEGLELLEEDKANN--------


General information:
TITO was launched using:
RESULT:

Template: 3TDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1166 -20358 -17.46 -77.40
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -17.46
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.359

(partial model without unconserved sides chains):
PDB file : Tito_3TDW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3tdw-query.scw
PDB file : Tito_Scwrl_3TDW.pdb: