Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTSQGEMRGR-LRSNASSTGILSSNTYA-KHTLKCSLKPEAMELI-RCRHLNIQTTH-V-KAIELVSFNEAK-NRLITKKVIGKELFHA-LWNPTNLLGRLQGHR-LQNPDTLVHRI-TEIGTWL-RKYHNSSAGLTPESTDGSWLVTAFAQKIRGIRASKLIPEPNLKKIEQ-KYS-TELQKLTTPDYLSFNNAFPCQVHGDFVLYNV-LVDSQQNMH-ILDFSKTRISSN-LEDVARFY-STLW------AIAQTNRTRRSL--LRELPTRFLKAYGLPPLIAETPYFRANLVYN-FLAHLEAQHR-GRKTFSWNTNREMGQITRAGMK-WI-YQQI------
3DXP Chain:A ((20-359))-RFDTEALEAWMRQHVEGFAGPLSVEQFKGQSNPTFKLVTPGQTYVMRAKPGAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIA-AMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET------ESIPAMDSLMDWLPQHIPQE----DADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHPMG-DFGYHCMSWHIAPGQFRGIAGLDHAALGIPDEASYRKLYEQRTGRPI----TGDWNFYLAFSMFRIAGILQGIMKRVVDGTASSAQALDAGKRARPMAEMGWEYAKKAKQ


General information:
TITO was launched using:
RESULT:

Template: 3DXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1343 26334 19.61 89.27
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 19.61
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.250

(partial model without unconserved sides chains):
PDB file : Tito_3DXP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxp-query.scw
PDB file : Tito_Scwrl_3DXP.pdb: