Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQAALAPGGFDEFEMHQVLKRGCAA-VGL---DSSEARL-LRGHTNAVIHLVK-----------EHVVVKIARKGSRIDDVARTVRFVRWLMDAGFPTVSLHPVDQPVGVGQHALTFWEYLPQPS-------DPVPAAQLAKPLYSLHTLPASPEALPA--HDNLAAIRRSLKSITC--------LSDEALAFLNGSTEQLESALHVVQFELPEGVIQGDPQHRNALHTAS------GGAVLCDWDTVAIGQPEWDLVTVEVHCRRF---------------GHGSQHYEAFANTYGWDV-----------------TRWSGYQTLAAIRELRMITTNARKVSDAP---TSLQEVERRVEGLRCHDRALRWNIL
5FTG Chain:A ((5-369))--------EPRTRRRAYLWCKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG-----EAMVLESVMFAILAERSLG-------PKLYGIFP-QGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLE--STPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYAQARFDAY------------


General information:
TITO was launched using:
RESULT:

Template: 5FTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 985 -49627 -50.38 -186.57
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -50.38
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.300

(partial model without unconserved sides chains):
PDB file : Tito_5FTG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ftg-query.scw
PDB file : Tito_Scwrl_5FTG.pdb: