Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQVDTLDTQKLAEYLEQHIDGFKGPIEADKFEGGQSNPTFKITAASGAYVLRRQPPGKLLKSAHAVDREFRVMAALKDT---DVPVPNVLHLCEDRDVIGSMFYVMEFCEGRILWSAGLPEMGEGEAANAVRGEMYSEMNRVLAAMHSVDLEAVGLTDYGKPGNYFERQLGRWTQQYEA-SKLQEIPAMDSLIEWLQANQPEDDGQVSLVHGDYRLDNMMWHPEKPQVIAVLDWELSTLGHPLADLAYQCMGMRMPQRGAKMAGLQGKDRTALGIPTEKEYVAMYCERRGISQIDNWEFYLAFSFFRLAAICQGVAKRAEDGNASNKQAAEVGALVEPLATMAMQIINEGA
5IQC Chain:A ((8-257))----NATNVKAMKYLIEHYFDNF-KVDSIEIIGSGYDSVAYLV---NNEYIFKTKFSTN---KKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYIS---DELSILGYKEIKGTFLTPEIYSTMSEE-----EQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEE-YILLRETIYNDLTDIEKDYIESFMERLNATTV-FEGKKCLCHNDFSCNHLLLDGN-NRLTGIIDFGDSGIIDEYCDFIYLLEDSEEE----------------IGTNFGEDILRMYGN----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1019 -15796 -15.50 -64.21
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -15.50
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.283

(partial model without unconserved sides chains):
PDB file : Tito_5IQC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqc-query.scw
PDB file : Tito_Scwrl_5IQC.pdb: