Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MTAAEAGADTDAALLALAQRLAAQAGKA-------TPTALTRLAGGRNNQVFRVDTE---------AGPLVLKRYFTDARDSRDRLGAEWSFISHAWSRGVRVVPEPMACDRAVQAGLYSFVEGRKLTAAE-LAPAHVDAAIDFVLAVNAPPRPTLAPGSEACFSLAEHIATVERRVARLATLDADVPHVSEARQFVATRLQPAWAEVKATILRGAAAEGLALDAAIPADQVCLSPSDFGFHNALIDDQGKLTFLDFEYAGRDDPAKLVSDFFCQPEV----------------PVPLAAHEHFIDRLADGLGLD---------AASVARCRLLLDAYQVKWTCIILNDFLPLGAVRRAFADTGAWAQRCAVQLAKAEAQLGLIGATSD 1NW1 Chain:B ((55-422)) ----------------RAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHL--GPKLYGIFS--GGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEPD----YLCEALQRWLKQLTGTVDAEHRFDL-PEE-CGVSSVNCLDLARELEFLRAHI---------SLSKSPVTFCHNDLQEGNILLPK--RLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVEL---S----PVGFGFADYGRDRLSLYFKHKQLL-----

General information: TITO was launched using: RESULT: Template: 1NW1.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1278 -44232 -34.61 -149.43 target 2D structure prediction score : 0.59 Monomeric hydrophicity matching model chain B : 0.64 3D Compatibility (PKB) : -34.61 2D Compatibility (Sec. Struct. Predict.) : 0.59 1D Compatibility (Hydrophobicity) : 0.64 QMean score : 0.261

(partial model without unconserved sides chains): PDB file : Tito_1NW1.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1nw1-query.scw PDB file : Tito_Scwrl_1NW1.pdb: