Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGVKTQLSLHELNQLFPSYG-FTEIKPTISGIIDTTYIIHNETTGYILKRY-------ERDITRKIELDIKLLNELKSVGLNVPACLDSN-------YGWYIYEKLEGKQPTNT--KSYHIQALGRFLAKMHSQTSKMRCDSNRIIE-DEVTQSLKYVKENFFAYYK------------RFEFLKNFTHKHEAIIHGD--------IFKDNTIFN--------GRKIGVIDFIDSSCGTFAYDVAVTLVG---------FDARERH--DYYINLFLKNYNQHAPKKLSKKVVKEKMKFAANFFALKR----VHEY-------------KNTSRAKELLK-----------------------
4OCV Chain:A ((24-378))----TNEALFDVASHFALEGTVDSIEPYGDGHINTTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSGF--DANQLTETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSIT-AREAELLPFSGNLLTMECGMRFLADYLEGDVYFATKYPEHNLVRSRTQIKLVREMEQRADETRAIVADVMETT


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1055 21974 20.83 85.17
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 20.83
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.390

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: