Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLRRAELDDDLGRRRAATPAPQRVEELLAVELPAVGEELDGAVVPIDYGTSTELTVTAPDLFAALSRHPRAGRIVASVGDVRRLSGGFSKEMLMARATYSDGSGERFVVRKVAPGRRADGLRAEYDVLSSAFH-SGCPVPEPWWYDSEALGTPA----IATSALSGTPAGDPNGWVAPPSSAVLASVARAAAQQHQVELAAFDANPLPPLISAEDRREALSERRAVLDGLWAEGDD---AWAPAFNLVLNWLESAIPEPADPPVLVHGDFGPHNFLIEG-DELSGILDWERSHAGLAVEDLAYLRPTLDDESWTAFMREYVAAGGREPSDDALVWYIVWQDFWRAVSAYRMRSLFLQSPDQVLYGISGLLLAPRFLTSAVRSVSSAHAVAGARAC
5IGH Chain:A ((7-258))-------------------------------------------------------ADTSQLYALAARH--GL---KLHGPLTVNELGLDYRIVIATVDD----GRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTAMVIQPGSSTPDWVV--PQDSEVFAESFATALAALHAVPISAAVDAGMLIR-----TPTQA---RQKVADDVDRVRREFVVNDKRLHRWQRWLDDDSSW-PDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVFGEEGLAKLLLTYEAAGGRV--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 966 -32922 -34.08 -135.48
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -34.08
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.279

(partial model without unconserved sides chains):
PDB file : Tito_5IGH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igh-query.scw
PDB file : Tito_Scwrl_5IGH.pdb: