Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNAEIKDKNYKKLKRNAQNIILKYLGEKREIDGVYNNNWVFLT---TDNKKPY-----MVKFVPQNEARRLEIENTMYKFITSKTDIPVPEVLTYGQNQHGSYLLREVIEGHSLKEYFKKTRNVENIFYEAGQILAKLHSIEFEDKGIIKPDLSVKKYDIFSKTEYLFFLEKLFVNGVISREK---YSLLKKVDINYYFGGRKNVLCHCDYTPNNILVK-NNQIVGIIDFEWASSAPFMDDLVSFDLFAELDGFNRQINSYYKGYKLIKEIDKFYFENINFYKFYRLITMLSYQVGVTDERYDYQFYNKMRKRFKDIIANCQF
5IQC Chain:A ((46-232))------------------------------------NNEYIFKTKFSTNKKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSI-----LGYKEIK-GTFLTPEIYSTMSEEEQNLLKRDI-------ASFLRQMHGLDYTDISECTID---NKQNVLE--EYILLRETIY-NDLTDIEKDYIESFMERLNATTVFEGKK-CLCHNDFSCNHLLLDGNNRLTGIIDF---GDSGIIDEYCDF------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 529 -14034 -26.53 -80.19
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -26.53
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.209

(partial model without unconserved sides chains):
PDB file : Tito_5IQC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqc-query.scw
PDB file : Tito_Scwrl_5IQC.pdb: