Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKELSRLVHRSFHIIPRQEDFRPLALGASGRTIVRIHFGGRTCIGIQWGND----RADN-DSFIPAARHLHAHGVNVPEIYDYEPL-----GPGCGAALVEDLGDANLLAFRKEPWPSLRLRYIRAMEQLHLLHSCPFPEEFPLQP-AFDEAL-YRWEQSYFAEHFL----GSHLGLETASFLNHPALKEQA---QFLA--ALPECPVHRDSQSQNVHIHA---GKTWLIDFQGMRGGRPEYDLASLVYDGYA------------RLEPEQADELLREWENISAHSIDHRIFRACALQRIMQMLGAYANIGHNQGKTWYLAQIPAGLGHLRKLLPGSTLAEPLAAMLA
4OCV Chain:A ((29-298))-----FDVASHFALEGTVDSIEPYGDGHINTTYLVTTD-GPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLVP-----NPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVG-------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 939 -20804 -22.15 -88.90
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -22.15
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.192

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: