Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQAQFEKVIEVLFPDIIIQEVTAYEKGWDNDIFIVN---KEIVFRFPRSEE-VASKVKDEIILLKHLAHKEPKLDIPRYKGIEMD----------GNLKCVKYNFMKGKSLSEIKNSRLDLHSAELLGDFLSRLHSIELSALKETNITSFHTDTYW--ENLYE---SAKTYVFP-NITHSERAE---IQQFYEDFSNNPIYSNVNKAVIHGDLTAANILYNKEE-ECVSGIIDFTDAQIADPAFDFAGLYWAY-----GPEFTKKLLTYYDGKD--KTGIFERVQSFYGLQPIFHELIYAVKENHDVDWGSALERFQYLNSHR
6EF6 Chain:A ((29-317))----TIAQQALTHYDVSDNASLRLL-NLSENATYLVEDGEHQSILRVHRQDYHQPHEIESELDWLAALRTD-SDVTVPTVVPARDGRRVVTVDPADVPRHVVHFEMVGGAEPDEESL---TLDDFQTLGRITASLHEHSQRWTRPAGF----GRFSWDWEHCLGDTPRWGRWQDAEGVGASETALLTRAQDLLHRKLEEYGSGPDRYGLIHADLRLANLLVDSSTPQRTITVIDFDDCGFGWYFYDFGTAVSFIEHDPRLGEWQESWVAGYRSRRELPAADEAML-PSFVFLRRLLLLAW------------------------


General information:
TITO was launched using:
RESULT:

Template: 6EF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1125 -1282 -1.14 -5.03
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -1.14
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.336

(partial model without unconserved sides chains):
PDB file : Tito_6EF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6ef6-query.scw
PDB file : Tito_Scwrl_6EF6.pdb: