Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISNTPSFPASWNIEAAKRIADTPAGIVYELTRKD---------GSLAIAKVLKKKV-----LKDSLRGADFIAWRAGIGCVELLDQSDNILLMEHA-GTETLRDVLFRDGNDDATTEIAAEVLLRYHQPSEQSPPS-SL-------LTLPLYFESLFRKAEQDR--S--DGVDSPFVEAARLAQTL---IDQQRDIKPLHGDLHHENIMHSDRGWIIIDPA-GLIGDAALDVANMFSNPLDRFD------------LTRSEARIASMAAIFSRALQR----D-------ERLLLQYAFAYGCLSATWHEEDGNAEERDNELAVAATIKAVLKHF
3C5I Chain:D ((39-331))-----------------KQIL--LTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSK-YKI-APQLLNTFNGGRIEEWLYGD-PLRIDD-L--KNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTNKCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGY---------------------


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 824 4915 5.96 20.91
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain D : 0.63

3D Compatibility (PKB) : 5.96
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.284

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: