Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTTPDLPKERVITQEEFDNAVKL-GGKFAPVFKVDEKTVVKTSDM-----TQLGEAAAMKMVREK-TTIPVPEDQNVYTDPTTGDVPIVMDFIEGDCLLD-VWDTYDNDQKQQIIEQLHSYFAQLRELKGSFIGSVDGKFCFDQVFDQDIGGHGPYE-DEASFNEGLVKALKNTMISGWGDTVCDMVL-A-----MKDHEIVFTHGDISPRNILVKDCNIVSVLDWEYSGYYPEYWEYAKAFFRP--AWEKSWIKDRAVNKILKPYPLENAICQHVFSFGAW
4DCA Chain:A ((37-270))---------------IKINELRYLSSGDDSDTFLCNEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ------SDRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDAL-VNK-------KDKFLQDKKLLISILEKEQL--LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFG-----KEFGRKVLKYYQHK-------------


General information:
TITO was launched using:
RESULT:

Template: 4DCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 784 17358 22.14 79.99
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 22.14
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.304

(partial model without unconserved sides chains):
PDB file : Tito_4DCA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dca-query.scw
PDB file : Tito_Scwrl_4DCA.pdb: