Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAAEAGADTDAALLALAQRLAAQAGKAT-PTALTRLAGGRNNQVFRVDTEAGPLVLKRYFTDARDSRDRLGAEWSFISHAWSRGVRVVPEPMACDRAVQAGLYSFVEGR-KLTAAEL--APAHVDAAIDFVLAVNAPPRPTLAPGSEACFSLAEHIATVERRVARLATLDADVPHVSEARQFVATRLQPAWAEVKATILRGAAAEGLALDAAIPADQVCLSPSDFGFHNALIDDQGKLTFLDFEYAGRDDPAKLVSDFFCQPEVPVPLAAHEHFIDRLADGLGLDAASVARCRLLLDAYQVKWTCIILNDFLPLGAVRRAFADTGAWAQRCAVQLAKAEAQLGLIGATSD
3DXQ Chain:B ((5-260))----------------EARAKLAAIPMLAGYTGPLERLGGLTNLVFRA----GDLCLRIP---------NRANEAVAAREAAKAGV--SPEVLHVDPATGVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPF-RF-------ELFAMIDDYLKVLSTKNV----------TLPAG-YHDVVREAGGVRSAL---------AAHPLPLAACHCDPLCENFLDTG-ERMWIVDWEYSGMNDPLWDLGDLSVEG--KFNANQDEELMRAYFGGEA-RPAERGRVVIYKAMCDLLWTLWGLIQ----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1158 -17449 -15.07 -71.51
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -15.07
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.232

(partial model without unconserved sides chains):
PDB file : Tito_3DXQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxq-query.scw
PDB file : Tito_Scwrl_3DXQ.pdb: