Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTHVHFPWYLHSIRKQRRNTCNILQNLVSNSKTSLQNAPVLYLRFLASYRVSSETTASEAICLPTIAEIEAATELISAPDASAKVVRVNERFAVKMGYGI-----PLIEAENMKFLAAN--SKVPVPKVHAAFRDPDTNKTYIIMEYLPGHTLEK-LLPSLDPVEKATISNLIKDAITELRKGLDPKISGP-FANQGDMNL---AIIEKIRQTESDQYIRLLRNMIDRT----LNSHRSVFTHGDLQPKNIMVERFGDRNVCPQFRISLLDWESAGWYPELWDFCNATIACRFKPDWLELVPDILEQYPVEFLMMQVVYSSVFY
5IQC Chain:A ((35-257))------------------------------------------------------------------------------GSGYDSVAYLVNNEYIFKTKFSTNKKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYIS--DELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYILLRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNR-------LTGIIDFGDSGIIDEYCDFIYLLEDSEEEI-GTNFGEDILRMYGN--------------


General information:
TITO was launched using:
RESULT:

Template: 5IQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 785 -3356 -4.28 -16.21
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -4.28
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.238

(partial model without unconserved sides chains):
PDB file : Tito_5IQC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqc-query.scw
PDB file : Tito_Scwrl_5IQC.pdb: