Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAWPSMGQQ--------LGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLLARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLALMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG
4GKH Chain:A ((83-269))---PTIKHFIRTPDDAWLLTTAIPGKTAFQV-----LEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFS-----PDSVVTHGDFSLDNLIFDEGKL--IGCIDVGRVGIADRYQDLAILWNCLGE--FSPSLQKR----LFQKYGIDNPDMNKLQFHLMLD-----


General information:
TITO was launched using:
RESULT:

Template: 4GKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 646 -20863 -32.30 -116.55
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -32.30
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_4GKH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4gkh-query.scw
PDB file : Tito_Scwrl_4GKH.pdb: