Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSISEVQHQLNLTSYLNQQATVSVFLGVKEIQIDQVQQLATHTYKLTFKNSNKKIILHTKSSNAQVTGNQLEKDYMIAQKLSAANMPVPKALFYCGDQSIVGVPFYATEYVEGRLFNDKKLLSVSQTEKKLLFQEVSKALAHLHSISLNYLGLGELESQTSQYQTLNKKLYNLYKLHETKISTNVEDLLYWLSLNSPVKSELDNLCLVHGDFSLSKVVFHPTEPKVLAILDWQQAQLGNAFIDLASFVSPYYIPYSNGQHQIDGWFGIEEIIAQPNLQEVLSAYFTTRSSETTQDINYQLVISLLKQSIDQQILYKQTKEEKYQDNSHFISKAGYELLLRTTEGDPFGIKLRANNDGQLWSNWPVSQRCKSYYYRIKDFMKDEIFPVEKAILDKARAVPRTVKNKPIVEIEELQRKAKAVGLWNLFISDPMYGKGLTNLEYVYLSELMGLS-Y-LAHEVFNCFAPETGNIKLLIAYGTPHQKEKYLKPLLEGQCKSFFAMTEKDVPSSDPNNFQCTITPTEGGFILNGGKWFVSSAPDERAIFGIVMGKSSKDMSNPIESQSMILVDMNNPKIKIVRQYSVLGFFDVPHGYSEVEFDNAFIPQENLLGQLGGAFKMAQGRLLGGRLHHCVRQIGLTRRCLDLMMARSEKRIIFKQSLKDNAAFQERLGDLEIAFQSCRLLSLNAGLLLDSAGSRHLHTFMAVSECKAHIPKACQYIIDQCIQAFGAEGVTEEQPLTLAYRFARAIRFMDGPCEIHLRQISRFAYGNHLFNDLNNAQGYGLAKL
2JIF Chain:A ((24-403))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENS------------KMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVA-VFCE--IQNTLINTLIRKHGTEEQKATYLPQLTT-EKVGSFCLSEAG-AGSDSFALKTRADKEGDYYVLNGSKMWISSAEH--AGLFLVMANVDPT--IGYKGITSFLVDRDTPGLHIGKPENKLGLRA--SSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGK--PF-I-KEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDAE-----------------


General information:
TITO was launched using:
RESULT:

Template: 2JIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2179 -48669 -22.34 -128.75
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -22.34
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.227

(partial model without unconserved sides chains):
PDB file : Tito_2JIF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2jif-query.scw
PDB file : Tito_Scwrl_2JIF.pdb: